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Molecular Shapes&Isomerism

Objectives

  • Understand the 3-dimensional nature of molecules
  • Learn about Molecular Symmetry
  • Be able to identify the various isomers possible for one molecular formula
  • Be able to identify enantiomers

Grading

  • Quiz (10%).
  • Lab Report Form (90%).

Before Coming to Lab . . .

Look over the following to make sure you have a basic understanding of the topics presented.

  • Drawing Lewis Structures
  • Determining the Shapes of Molecules from their Lewis Structures
  • Some Basic Aspects of Bonding
  • Model Kits

Introduction

The shape of a molecule is extremely important in determining its physical properties and reactivity. A multitude of shapes are possible, and in today’s lab, you will be looking at several.

In Part 1, you will be exploring the various symmetry elements that can be present in molecules. The symmetry elements you will be looking for are mirror planes, rotation axes, and inversion centers. Being able to determine which symmetry elements are present in a molecule help in understanding its chemistry. If there is a plane present in the molecule that has the exact same arrangement of atoms on either side of the plane, then the molecule has a mirror plane ( σ ) . It is important to note that a molecule can have more than one mirror plane. Rotation axes are represented as C n (n = 1, 2, 3 . . .). The subscript indicates how many degrees of rotation (360 o /n) are needed in order to return to the same orientation of atoms with which you started. So if there is a C 2 axis, the rotation would be 180 o . An example of a molecule having a C 2 axis is H 2 O.

The third symmetry element is an inversion center (i) . In such molecules, starting at any position and drawing a line through the center and an equal distance to the opposite side of the molecule, you will end up at a position with an identical environment to the one you started from.

Part 2 of the lab introduces the concept of enantiomers. Enantiomers are molecules sharing the same molecular configuration, but they are non-superimposable images of each other. This concept should become clearer as you build the models for this part of the lab. Enantiomers share many of the same physical properties. The property which distinguishes them is the direction in which they rotate plane-polarized light. They will rotate the light in equal amounts but in different directions ( plane-polarized light is just light in which all wave vibrations have been filtered out except for those in one plane ). If both enantiomers are present in a 1:1 ratio, the effects of the rotation of light cancel and no net rotation is observed. Such a mixture of isomers is known as a racemic mixture or as a racemate . Because these isomers rotate plane-polarized light, they are also known as optical isomers . Compounds that form optical isomers are said to be chiral .

The chemistry of enantiomers is of great importance in the field of medicine. It has been discovered that with many drugs, one enantiomer will be biologically active while the other will be inactive or even produce undesired side effects. For this reason, it has become advantageous for pharmaceutical companies to try to synthesize the active enantiomer exclusively.

Questions & Answers

what is microbiology
Agebe Reply
What is a cell
Odelana Reply
what is cell
Mohammed
how does Neisseria cause meningitis
Nyibol Reply
what is microbiologist
Muhammad Reply
what is errata
Muhammad
is the branch of biology that deals with the study of microorganisms.
Ntefuni Reply
What is microbiology
Mercy Reply
studies of microbes
Louisiaste
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Ziyad Reply
How bacteria create energy to survive?
Muhamad Reply
Bacteria doesn't produce energy they are dependent upon their substrate in case of lack of nutrients they are able to make spores which helps them to sustain in harsh environments
_Adnan
But not all bacteria make spores, l mean Eukaryotic cells have Mitochondria which acts as powerhouse for them, since bacteria don't have it, what is the substitution for it?
Muhamad
they make spores
Louisiaste
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Aminu Reply
the significance of food webs for disease transmission
Abreham
food webs brings about an infection as an individual depends on number of diseased foods or carriers dully.
Mark
explain assimilatory nitrate reduction
Esinniobiwa Reply
Assimilatory nitrate reduction is a process that occurs in some microorganisms, such as bacteria and archaea, in which nitrate (NO3-) is reduced to nitrite (NO2-), and then further reduced to ammonia (NH3).
Elkana
This process is called assimilatory nitrate reduction because the nitrogen that is produced is incorporated in the cells of microorganisms where it can be used in the synthesis of amino acids and other nitrogen products
Elkana
Examples of thermophilic organisms
Shu Reply
Give Examples of thermophilic organisms
Shu
advantages of normal Flora to the host
Micheal Reply
Prevent foreign microbes to the host
Abubakar
they provide healthier benefits to their hosts
ayesha
They are friends to host only when Host immune system is strong and become enemies when the host immune system is weakened . very bad relationship!
Mark
what is cell
faisal Reply
cell is the smallest unit of life
Fauziya
cell is the smallest unit of life
Akanni
ok
Innocent
cell is the structural and functional unit of life
Hasan
is the fundamental units of Life
Musa
what are emergency diseases
Micheal Reply
There are nothing like emergency disease but there are some common medical emergency which can occur simultaneously like Bleeding,heart attack,Breathing difficulties,severe pain heart stock.Hope you will get my point .Have a nice day ❣️
_Adnan
define infection ,prevention and control
Innocent
I think infection prevention and control is the avoidance of all things we do that gives out break of infections and promotion of health practices that promote life
Lubega
Heyy Lubega hussein where are u from?
_Adnan
en français
Adama
which site have a normal flora
ESTHER Reply
Many sites of the body have it Skin Nasal cavity Oral cavity Gastro intestinal tract
Safaa
skin
Asiina
skin,Oral,Nasal,GIt
Sadik
How can Commensal can Bacteria change into pathogen?
Sadik
How can Commensal Bacteria change into pathogen?
Sadik
all
Tesfaye
by fussion
Asiina
what are the advantages of normal Flora to the host
Micheal
what are the ways of control and prevention of nosocomial infection in the hospital
Micheal
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Source:  OpenStax, Honors chemistry lab fall. OpenStax CNX. Nov 15, 2007 Download for free at http://cnx.org/content/col10456/1.16
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