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For FORTRAN programs, a library timing function found on many machines is called etime , which takes a two-element REAL*4 array as an argument and fills the slots with the user CPU time and system CPU time, respectively. The value returned by the function is the sum of the two. Here’s how etime is often used:


real*4 tarray(2), etime real*4 start, finishstart = etime(tarray)finish = etime(tarray)write (*,*) ’CPU time: ’, finish - start

Not every vendor supplies an etime function; in fact, one doesn’t provide a timing routine for FORTRAN at all. Try it first. If it shows up as an undefined symbol when the program is linked, you can use the following C routine. It provides the same functionality as etime :


#include<sys/times.h>#define TICKS 100.float etime (parts) struct {float user; float system;} *parts; {struct tms local; times (&local); parts->user= (float) local.tms_utime/TICKS; parts->system = (float) local.tms_stime/TICKS; return (parts->user + parts->system); }

There are a couple of things you might have to tweak to make it work. First of all, linking C routines with FORTRAN routines on your computer may require you to add an underscore (_) after the function name. This changes the entry to float etime_ (parts) . Furthermore, you might have to adjust the TICKS parameter. We assumed that the system clock had a resolution of 1/100 of a second (true for the Hewlett-Packard machines that this version of etime was written for). 1/60 is very common. On an RS-6000 the number would be 1000. You may find the value in a file named /usr/include/sys/param.h on your machine, or you can determine it empirically.

A C routine for retrieving the wall time using calling gettimeofday is shown below. It is suitable for use with either C or FORTRAN programs as it uses call-by-value parameter passing:


#include<stdio.h>#include<stdlib.h>#include<sys/time.h>void hpcwall(double *retval){ static long zsec = 0;static long zusec = 0; double esec;struct timeval tp; struct timezone tzp;gettimeofday(&tp,&tzp);if ( zsec == 0 ) zsec = tp.tv_sec; if ( zusec == 0 ) zusec = tp.tv_usec;*retval = (tp.tv_sec - zsec) + (tp.tv_usec - zusec ) * 0.000001 ;}void hpcwall_(double *retval) { hpcwall(retval); } /* Other convention */

Given that you will often need both CPU and wall time, and you will be continu- ally computing the difference between successive calls to these routines, you may want to write a routine to return the elapsed wall and CPU time upon each call as follows:


SUBROUTINE HPCTIM(WTIME,CTIME) IMPLICIT NONE* REAL WTIME,CTIMECOMMON/HPCTIMC/CBEGIN,WBEGIN REAL*8 CBEGIN,CEND,WBEGIN,WENDREAL ETIME,CSCRATCH(2) *CALL HPCWALL(WEND) CEND=ETIME(CSCRATCH)* WTIME = WEND - WBEGINCTIME = CEND - CBEGIN *WBEGIN = WEND CBEGIN = CENDEND

Using timing information

You can get a lot information from the timing facilities on a UNIX machine. Not only can you tell how long it takes to perform a given job, but you can also get hints about whether the machine is operating efficiently, or whether there is some other problem that needs to be factored in, such as inadequate memory.

Once the program is running with all anomalies explained away, you can record the time as a baseline. If you are tuning, the baseline will be a reference with which you can tell how much (or little) tuning has improved things. If you are benchmarking, you can use the baseline to judge how much overall incremental performance a new machine will give you. But remember to watch the other figures — paging, CPU utilization, etc. These may differ from machine to machine for reasons unrelated to raw CPU performance. You want to be sure you are getting the full picture.

Questions & Answers

what is microbiology
Agebe Reply
What is a cell
Odelana Reply
what is cell
Mohammed
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Nyibol Reply
what is microbiologist
Muhammad Reply
what is errata
Muhammad
is the branch of biology that deals with the study of microorganisms.
Ntefuni Reply
What is microbiology
Mercy Reply
studies of microbes
Louisiaste
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Ziyad Reply
How bacteria create energy to survive?
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Bacteria doesn't produce energy they are dependent upon their substrate in case of lack of nutrients they are able to make spores which helps them to sustain in harsh environments
_Adnan
But not all bacteria make spores, l mean Eukaryotic cells have Mitochondria which acts as powerhouse for them, since bacteria don't have it, what is the substitution for it?
Muhamad
they make spores
Louisiaste
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Aminu Reply
the significance of food webs for disease transmission
Abreham
food webs brings about an infection as an individual depends on number of diseased foods or carriers dully.
Mark
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Esinniobiwa Reply
Assimilatory nitrate reduction is a process that occurs in some microorganisms, such as bacteria and archaea, in which nitrate (NO3-) is reduced to nitrite (NO2-), and then further reduced to ammonia (NH3).
Elkana
This process is called assimilatory nitrate reduction because the nitrogen that is produced is incorporated in the cells of microorganisms where it can be used in the synthesis of amino acids and other nitrogen products
Elkana
Examples of thermophilic organisms
Shu Reply
Give Examples of thermophilic organisms
Shu
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Micheal Reply
Prevent foreign microbes to the host
Abubakar
they provide healthier benefits to their hosts
ayesha
They are friends to host only when Host immune system is strong and become enemies when the host immune system is weakened . very bad relationship!
Mark
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faisal Reply
cell is the smallest unit of life
Fauziya
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Akanni
ok
Innocent
cell is the structural and functional unit of life
Hasan
is the fundamental units of Life
Musa
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Micheal Reply
There are nothing like emergency disease but there are some common medical emergency which can occur simultaneously like Bleeding,heart attack,Breathing difficulties,severe pain heart stock.Hope you will get my point .Have a nice day ❣️
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I think infection prevention and control is the avoidance of all things we do that gives out break of infections and promotion of health practices that promote life
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ESTHER Reply
Many sites of the body have it Skin Nasal cavity Oral cavity Gastro intestinal tract
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skin
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what are the ways of control and prevention of nosocomial infection in the hospital
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Source:  OpenStax, High performance computing. OpenStax CNX. Aug 25, 2010 Download for free at http://cnx.org/content/col11136/1.5
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